Browse of TCMCG041C12351 protein

CDS

Accession Number	TCMCG041C12351
gbkey	CDS
Protein Id	XP_010257656.1
Location	join(5734705..5734728,5735285..5735358,5735498..5735637,5735726..5735812,5735953..5736040,5736115..5736198,5740284..5740361,5740489..5740571,5750643..5750721,5750851..5750978,5751053..5751188,5751266..5751325,5752109..5752370,5762391..5762660,5762975..5764357,5766752..5767019,5767101..5767236,5768060..5768147,5768410..5768488,5770788..5771083,5783480..5784581,5784740..5785111,5785744..5786345)
Gene	LOC104597669
GeneID	104597669
Organism	Nelumbo nucifera

Protein

Length	1972aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA264089
db_source	XM_010259354.2
Definition	PREDICTED: mediator of RNA polymerase II transcription subunit 13 [Nelumbo nucifera]

EGGNOG-MAPPER Annotation

COG_category	K
Description	Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K15164        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04919        [VIEW IN KEGG] map04919        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005215        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008643        [VIEW IN EMBL-EBI] GO:0015144        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016021        [VIEW IN EMBL-EBI] GO:0022857        [VIEW IN EMBL-EBI] GO:0031224        [VIEW IN EMBL-EBI] GO:0034219        [VIEW IN EMBL-EBI] GO:0040034        [VIEW IN EMBL-EBI] GO:0044425        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050793        [VIEW IN EMBL-EBI] GO:0051119        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051239        [VIEW IN EMBL-EBI] GO:0055085        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0071702        [VIEW IN EMBL-EBI] GO:0090213        [VIEW IN EMBL-EBI] GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTGGACGAATGTTTTCAAAATTGGAGGTCTTCAGCAAATTTCCTGGTTCCAGTTTCTCCCATATGAATCTGATCTGAGCCCTCTACCTGAGAAAAGTGTGAAAGCGGATCAGAAGGATGCTGCTACACTGCTCGTACTTTCATCACATCTGCAATTGCAACAGGAAGGGCTTCTCAGTGCATGGACCAATTCCTTTGTTGGTCCATGGGATCCATCTCAGGGTATGCACAATCCAGATGAGAAAATCAAACTCTGGCTTTTCCTTCCTGGGCGCCATTCATCTGTTGTTGAGCATGCTCAAGCTGCAGTCTCCAGATTAAGAGTTGTTGGAACTGGACTGTGGTTGGCCCCTGGGGATTCAGAAGAGGTTGCTGCAGCTTTATCTCAGGCTCTACGAAATTGCATAGAAAGATCTATTAGGGGGCTTTCCTATGTGAGATTTGGAGATGTATTTTCCAGATGCCTTCCATTTTTGAGAGCTGAGAAACTTTTCAGGAGGGTGCAGCCGACAGTTGAGTTTGTGTTTGCAGCCACTGAAGAGGCAATCTTTGTGCATGTCATAATATCTGCAAAGCATGTTCGCCCACTTTCATGTGATGACATGGAATCTGTACTACGACATCTCTCTTCCAATAATACTGGTGAAAGACTACCTGTTATTATTGCTCCTCATGGAATGAGAGGTAAGCTTACAGGATGCTGTCCAAGTGATCTTGTGAAGCAAGTTTATTTTAGCAAAGCTAGGACTTCGAATGGGTTTACTGTTCTTGGTTTGCCTTCCCAAGCTGTTCAAGCTTCTAGTTGCCAGCTGAGGGGGCAAAATTGCCATGTTGAGATTACTCTTGGCTGCACTGGCAAAGGAGTGGCTCTTGCAAAAGTTGGTCTGAAGCAAGGACCGGGACATCATTATCCTGTTCTTCAAAGGACATTCATTTATCCAGCTGAAGCAGTGCTGGTCCCAGTCATGCATACAGTGTTTGCTAAATCTTCTTTGAAAAGGATCTGGGTACAAAATTGGGTAGGGACATCATTGTTTGGTTCATCTTTCTTTATGCATTGCTTGGGACTTGGAAGTACTGGTAAAATGGAGTCTTTAGATGGGCAGGGGATTGACTCCAGTGGAATACACACGCTACACAGTAATAATAGCAGTAGCAACAGTAATAGCAGTAGCAACAACAGCATAAGTAACACATCCAGTGAGAGTGATTACAGGAATACCACAAGGGGTAGTGACCTTGAAGCAGATGCTGATTCTCTAACATGTAGACAGTCTGGTTTATCTTCTTCGGATCAGTTGGAGAATGATGGTCTCAAATTGGCTTCCAAGCGTCCCCGCACAAGCATGACAGATTCTTTTGGCCAGACAGGCACAGTAATAAATGAAACCATGCAAGATCCATACAAGTCCGAGTATAATTCCATTGAAGTTAACAACTCTGCCACTGCAGGAGTGGCAAATGATCAGGTTGGACCTCTTTGGGTTTGGGATGATGAAGACAGGGCTACAGGCATGGATATCCAAACACTTCTATCTGAGTTTGGAGATTTTGGTGACTTCTTTGAAAATGATGCTCTGCCTTTTGGGGAGCCTCCAGGGACTGCAGAGTCACAGGCCCTATTGTTTCCAGTGGATGGTGGTGATGGTAGCAGCAGTCCTTGTACTATGGGAATTGATGTAACAGATCAAATGCTTTTGCCTGCTTTAGGGTTTCCATCTTTTGAAGGGTTTAACCAACTTCCTAAAGATGTTACAGAGGAGTTTAATAGCAAAAATCAAGAAATTCAGTCTTCAGGTCCCGGGAGCAATTCTTTAGCTCCTTCCACGGGTGAGTCTGACCATTTGTCTAAAGTGGAAGCCATGATGATATTTGCTCCAGAATATAGAGCAATTGAAGCCTCTATAAGTGAGTTGCCCTCATCAATTTTCAGAAGCCCATATTTACCCAGATCCAGAAAGGAAAATAGTTCACATTCAAGCTCAAATGTGTATGTCTATGGTGCAAGACCACCTTGTTCTCCATGCTTAGATGTCTCAGATGGGAAGCCTTCCATAGCTGTGAATTCAGAAACAGTTCCTGGTGGGTGTGAAGCAAATTCCATCCTTAACTTGAAGAAATATTACACCTATGTTGAGACTGAGAAAGAGAAACTTGATAGAGGATCGTTGGCTTGTAATAATAGCATTATTTCTTCTGAGGTGGTGACTTCATCCTGTGAGGGGGTAGCACCATCTTTTTCTGGTCTGACTTCCACACATGCTGTCAAATCTGTCCAGAGGAATAAGAATGGAAGTATGTTTGAAGCAGGGAACTTCCTGCTGTCTTCGAAGACTGTGCTTGCTGCAGATATTGAATGCATAATGTTCCAAGCTGCTATGTGCCGGATGCGGCATTTGCTTCTATCTTCCACTAATCTGGACTCTTCTGGTCTAGGCAAATTTAGTGGAGGTGTTGTTTCAACTCAGCTCCCAGGGGGCACAAGTACTGTGACAGACAAGTTCTCTAGCAGGTACGATGTAAAGAAGAAGGAATCTATACCAGTTAGAATAGCTGGTGATGTTGAGGGTGGAATGCTTGATGGACCTCTTAATGCACCAGTTGGTGTCTGGCGCTCTGTCGGAGTTCCTAAAGGAGCAAAATCTGCAAGTTCACCAAGCATTGATGGTGCTCCACCTATGCCTCATAATTCATTGAATGAAGAAGGTACTTTTGTATATGGGCAGAAACGGCCTCTTCAGGGGCTTCTTGATTCAATGCCCTTGCTTGTCCAACAGGCCACTTCATTTGTTGATGTGGCACTGGATGCTGACTATGGTGATGGTCCATATGGTTGGCTTGCATTAGAAGAGCAGCGTAGGCGTGGGTTCTCTTGTGGGCCTTCTAACATCCATGCAGGCTGTGGTGGAATTTTGGCTTCTTGTCATTCTTTGGACATTGCTGGAATGGAGTTACTTGATCCACTCTCTGCTAATGTCAATGTGGCATCCATGCTCAGTTTACTGCAGTCAGATATAAAAACAGCTCTAAAATCTGCTTTTGGGAATTTGGATGGTCCATTGTCCATACTTGATTGGTGCAAGGGCCGCAGTCAATCAAGTGATACAGGAAGTGTAGCCAATGGATATCTTGTTGAATCAACTTCAAGTGATTTGAAAGATTCTTCAAGTACTGTAGCTGTAGCTGCTGGAGAACCAGTAAGCCCCCCTCAGTCATCAACTGTTAGTTCAGCTGGATTAAAAGTGTCTAGTGCCACTGATGGAGTTAGGGTGGATGAGAATTTCCAGAGGAGATCAAACCAAGAAATCTGTGGTTCAGAGTCTGATCAACGTCTCAGGCCAACACCTACTGTGCTTCCATTGCCTGCTATACTTGTTGGGTATCAGGATGATTGGCTGAAGACATCAGCAAACTCTCTTCAACTTTGGGAAAAAGCTCCTCTTGAACCATATGCTTTACCAAAACCTATGTCTTATTATGTCATATGCCCCGACATTGATCCACTTACATCTGCTGCTGCTGATTTTTTTCAACAATTAGGGACAGTTTATGAAGCTTGCAAACTGGGAAATCATGCACCCCAAACTATGGAAAGCCAAACAGAGCTACCATCTGGGAGATGGCTGTCCTCTGGTTTTGTTATCATGGATTGTCCACAAACAATGAAGATTGAAAGCAGTAATGCATCTTTTGTGGGTTCAATAAGTGATTACCTTTTATCTTTATCTAATGGCTGGGAGTTGACCAGCTTTCTCAAGTCTCTTTCAAAAGTTCTTAAGTCTCTAAAACTTAGTTCGAGTTCCACAATGAGTCAAAAGGAAGGAGTTGCCGATCCTTGCACAGTAATCTATGTGGTGTGCCCCTACCCTGAACCTATTGCAGTTCTACAGACTGTGGTTGAGTCTTCTGCTGCCATTGGATCAATCATTCACGCATCAGATAAAGAGAGGAGATCAATGCTGCACACTCAGGTTGGGAAGGCTCTAAGTTGTTCAACAGCTGTGGATGAAGCATCGACATCAAATGTTCCAACAATTTCAGGGTTCAGTATTCCTAAATTGGTTCTGCAGATTATTACTGTTGATGCCATTTTCAGGGTTACTAGTCCAGCCCTTCATGAGCTTGTCCTTCTTAAGGAGATTGCATTCACCGTTTACAACAAGGCTCGCCGGATATCTCGGGTATCATGTAGTGATCTAGGACAGTCATTGGGCATCTCTGGTAGACCCCAGTCAACATTGATGCATATTGCTTCTCCTGTTCCCGGGATGTGGAAGGACTCTGTTACTCGAATTACAGGACCATCCCTTTCAAGAGATAATGAACTCGATTCTGGGTTAAGGCCTGGTACTTGGGATAATTCTTGGCAAACATCAAGGACTGGTGGAATAAACTGTGACCCAAACAGATCTGGGGATATTCTTCTTCAGGATGATACTCGATACTTGTTTGAACCTCTATTTATCCTTGCTGAACCTGGCTCTGTAGAGCATGGAATTTCACCAACAATGTCTGGTAGTGTGGCCTTAGAATCCTCAAGGCCTGCTGATGATAATGGTGGTGGTAGCTTTATGCAAAACACAAGTTCATTGGGAAGTGCTGATATTGGACCAGGCTCTCTGCTTGATGGATCAGATCTTGGTGTTCTTGGGTCTAGCTATCAAAAGGCACCAAGCCTTCATTGCTGTTATGGATGGACTGAGGACTGGCGTTGGCTAATTAGCATCTGGACTGATTCAAGAGGAGAGTTGCTTGATAACCATATATTCCCTTTTGGTGGCATTAGCAGTAGACAGGACACAAAGGGATTACAATGCCTTTTTGTTCAAGTTCTGCAACAAGGTTGCCAGATACTATCTTGTTCTCCCCCTGAGATAGCTCCTGCAAAGACCCGAGATATTGTGATAACTCGAATTGGATGTTTCTATGAGCTTGAATGCCAAGAATGGCAGAAAGCCATTTACACAGTTGGTGGAAATGAAGTAAAAAAGTGGCTACAACTACGAGGATCTGTATCTGATGGAATTCCTGGGAGCAGTAATGGGACTACGTTGCAGCAACAGGAGATGGGTTTGATTCAAGAGAGAGCCTTACCTTCCTCTCCAAGCCCTTCTTTGTATAGCCCTCATACAAAATCTTCTGGCTTTATTAAAGGTGGCATAGTTCAAAACAGTACAAGAAAGCAGCTTATGGGTGGGCAAACAACAGTTGACAGCTCAAGGGGGCTCTTTCAGTGGGTGCAGAGTATCAGTTTAATTGGAGTTTGCGTTGACCACTCCCTTCAACTAGCCTTTCAACCTGATGCACCCTTCCCTGGGGGAGGAACCCAAGGAGGCAGTGGAAATGCCCCATCTGTCTATCTGGAAGGTTTCAGCTCCATTAAGTCTGTTGGTTCTGTATCTGCATCCTACATTATTACCCCATCACCCAGTATGCGCTTCCTCCTTCCAATGCCATTGCAGCTTCCTACATGCCTAACTGCTGAATCCCCACCTCTTGCCCATCTCTTACATAGCAAGGGATCTGCTATTCCTCTACGTACTGGGTTTGTGGTGTCAAAAGCAGCTTCCTCCATAAGAAAGGACTCCAGGAGCAATGCCAAAGAAGAATGGCCTTCAGTCCTTTCAGTCAGTCTTGTTGACTACTATGGAACCAGCAACATTACCCAGAAGATTGTAAGAGGGAGTGGAACACAGGCCAGAACTATTGATAATAAAGATGGTGAATTAGAGACTCATTTGATTCTCGAGTCTGTTGCAGCAGAGCTCCATTCTCTATCTTGGATGACAGTGAGCCCAGCATACTTGGAAAGACGCACTGCATTGCCCTTTCACTGTGACATGCTTTTAAGGCTAAGAAGGCTACTCCATTATGCTGACAAGGAGCTCACTCAGCAGCGTGAAACCTTACAAGTGTAG

Protein:   MWTNVFKIGGLQQISWFQFLPYESDLSPLPEKSVKADQKDAATLLVLSSHLQLQQEGLLSAWTNSFVGPWDPSQGMHNPDEKIKLWLFLPGRHSSVVEHAQAAVSRLRVVGTGLWLAPGDSEEVAAALSQALRNCIERSIRGLSYVRFGDVFSRCLPFLRAEKLFRRVQPTVEFVFAATEEAIFVHVIISAKHVRPLSCDDMESVLRHLSSNNTGERLPVIIAPHGMRGKLTGCCPSDLVKQVYFSKARTSNGFTVLGLPSQAVQASSCQLRGQNCHVEITLGCTGKGVALAKVGLKQGPGHHYPVLQRTFIYPAEAVLVPVMHTVFAKSSLKRIWVQNWVGTSLFGSSFFMHCLGLGSTGKMESLDGQGIDSSGIHTLHSNNSSSNSNSSSNNSISNTSSESDYRNTTRGSDLEADADSLTCRQSGLSSSDQLENDGLKLASKRPRTSMTDSFGQTGTVINETMQDPYKSEYNSIEVNNSATAGVANDQVGPLWVWDDEDRATGMDIQTLLSEFGDFGDFFENDALPFGEPPGTAESQALLFPVDGGDGSSSPCTMGIDVTDQMLLPALGFPSFEGFNQLPKDVTEEFNSKNQEIQSSGPGSNSLAPSTGESDHLSKVEAMMIFAPEYRAIEASISELPSSIFRSPYLPRSRKENSSHSSSNVYVYGARPPCSPCLDVSDGKPSIAVNSETVPGGCEANSILNLKKYYTYVETEKEKLDRGSLACNNSIISSEVVTSSCEGVAPSFSGLTSTHAVKSVQRNKNGSMFEAGNFLLSSKTVLAADIECIMFQAAMCRMRHLLLSSTNLDSSGLGKFSGGVVSTQLPGGTSTVTDKFSSRYDVKKKESIPVRIAGDVEGGMLDGPLNAPVGVWRSVGVPKGAKSASSPSIDGAPPMPHNSLNEEGTFVYGQKRPLQGLLDSMPLLVQQATSFVDVALDADYGDGPYGWLALEEQRRRGFSCGPSNIHAGCGGILASCHSLDIAGMELLDPLSANVNVASMLSLLQSDIKTALKSAFGNLDGPLSILDWCKGRSQSSDTGSVANGYLVESTSSDLKDSSSTVAVAAGEPVSPPQSSTVSSAGLKVSSATDGVRVDENFQRRSNQEICGSESDQRLRPTPTVLPLPAILVGYQDDWLKTSANSLQLWEKAPLEPYALPKPMSYYVICPDIDPLTSAAADFFQQLGTVYEACKLGNHAPQTMESQTELPSGRWLSSGFVIMDCPQTMKIESSNASFVGSISDYLLSLSNGWELTSFLKSLSKVLKSLKLSSSSTMSQKEGVADPCTVIYVVCPYPEPIAVLQTVVESSAAIGSIIHASDKERRSMLHTQVGKALSCSTAVDEASTSNVPTISGFSIPKLVLQIITVDAIFRVTSPALHELVLLKEIAFTVYNKARRISRVSCSDLGQSLGISGRPQSTLMHIASPVPGMWKDSVTRITGPSLSRDNELDSGLRPGTWDNSWQTSRTGGINCDPNRSGDILLQDDTRYLFEPLFILAEPGSVEHGISPTMSGSVALESSRPADDNGGGSFMQNTSSLGSADIGPGSLLDGSDLGVLGSSYQKAPSLHCCYGWTEDWRWLISIWTDSRGELLDNHIFPFGGISSRQDTKGLQCLFVQVLQQGCQILSCSPPEIAPAKTRDIVITRIGCFYELECQEWQKAIYTVGGNEVKKWLQLRGSVSDGIPGSSNGTTLQQQEMGLIQERALPSSPSPSLYSPHTKSSGFIKGGIVQNSTRKQLMGGQTTVDSSRGLFQWVQSISLIGVCVDHSLQLAFQPDAPFPGGGTQGGSGNAPSVYLEGFSSIKSVGSVSASYIITPSPSMRFLLPMPLQLPTCLTAESPPLAHLLHSKGSAIPLRTGFVVSKAASSIRKDSRSNAKEEWPSVLSVSLVDYYGTSNITQKIVRGSGTQARTIDNKDGELETHLILESVAAELHSLSWMTVSPAYLERRTALPFHCDMLLRLRRLLHYADKELTQQRETLQV